Fluorescein-12-dUTP
Fluorescein-12-dUTP could be used in directly enzymatic labeling of DNA/cDNA, such as PCR, random primed DNA labeling reaction, primer extension, Nick Translation and others. It can be incorporated as a substitute for its natural counterpart dTTP. The Dye-labeled DNA/cDNA probes acquired are ideally suited for fluorescence hybridization applications - FISH or microarray-based gene expression profiling. Optimal substrate properties and labeling efficiency is ensured by an optimized linker attached to the C5 position of uridine. Recommendatory fluorescein-12-dUTP/dTTP ratio for PCR and Nick Translation: 30-50% Fluorescein-12-dUTP/ 70-50% dTTP. Please note: Please protect the Dye-labeled dUTP from exposure to light and experiment under low light conditions. The optimal final concentration of the Dye-labeled dUTP might very depending on the practical application and assay conditions. For generating optimal product yields and high incorporation rates, an individual optimization for the Dye-labeled-dUTP/dTTP ratio is recommended.
Fluorescein-12-dUTP is used as a substrate for:
- Taq polymerase
- phi29 DNA Polymerase
- DNA Polymerase I (holoenzyme and Klenow fragment)
- Terminal Transferase
- Reverse transcriptase (e.g., from AMV and M-MuLV).
References:
[1]. Wiegant et al. (2001) Probe Labeling and Fluorescence in situ Hybridization. Current Protocols in Cytometry 8:8.3.1.
[2]. Yie SM1, Xiao R, et, al. Progesterone regulates HLA-G gene expression through a novel progesterone response element. Hum Reprod. 2006 Oct;21(10):2538-44. Epub 2006 May 9.
Physical Appearance | Solution |
Storage | Store at -20°C or below |
M.Wt | 994.69 (free acid) |
Cas No. | 214154-36-6 |
Formula | C39H41N4O21P3 (free acid) |
Synonyms | Fluorescein-X-5-Aminoallyl-dUTP; 5/6-Fluorescein-X-5-aminoallyl-2'-deoxyuridine-5'-triphosphate, Triethylammonium salt |
Solubility | Soluble in sterile water,pH 7.5 ±0.5 |
SDF | Download SDF |
Canonical SMILES | OC1=CC(O2)=C(C3(C4=C2C=C(O)C=C4)C5=C(C(O3)=O)C=C(C(NCCCCCC(NC/C([H])=C([H])/C(C(N6)=O)=CN(C6=O)[C@@]7([H])C[C@@](O)([H])[C@@](O7)([H])COP(O)(OP(O)(OP(O)(O)=O)=O)=O)=O)=O)C=C5)C=C1 |
Shipping Condition | Small Molecules with Blue Ice, Modified Nucleotides with Dry Ice. |
General tips | We do not recommend long-term storage for the solution, please use it up soon. |
Quality Control & MSDS
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Chemical structure
